Your O'Reilly Account: New, Single Sign On -- O'Reilly customers and guests now have a single address and one password to access all things O'Reilly, from oreilly.com and Safari Bookshelf to all of the O'Reilly Network sites and DevCenters. When possible, we've consolidated your prior, separate accounts into one new account. Logging into the new system is quick and easy; details on how to do it have been emailed to you, and you can read more about O'Reilly's single sign on in Tony Stubblebine's weblog.
Java APIs for Bioinformatics --
This introduction to Java APIs for bioinformatics includes usage
information, examples, and current design challenges for API developers
in the life sciences field. You'll find all of O'Reilly's books and
articles on bioinformatics at bio.oreilly.com.
Safari Gets Bigger and Better -- There are now more than 2,000 books from the industry's leading technical publishers available on Safari Bookshelf. As the library grows, so does its functionality: searches are powerfully precise and as broad or specific as you wish; and now, with a Safari Max subscription, you can download chapters to read offline. Safari will help you save time, reduce errors, keep current, and save more money than ever with up to 35% off print copies of your favorite books. If you haven't
yet gone on Safari, try a free trial subscription.
A Chromosome at a Time with Perl, Part 2 -- In the conclusion
to his two-part series on using Perl in the bioinformatics realm, James Tisdall shows how references can speed up a subroutine call, how to bypass the overhead of
subroutine calls entirely, and how to quantify the behavior of your code.
James is the
author of Mastering Perl for
Bioinformatics.
A Chromosome at a Time with Perl -- James Tisdall offers a handful of tricks that will enable Perl programmers to write performance-efficient code for dealing with large amounts of biological sequence data. James is the author of Mastering Perl for Bioinformatics.
Twenty-First Century
Rocket Science -- Bioinformatics, genomics,
proteomics: these are the buzzwords of the twenty-first century. Ian Korf
shows you how to use BLAST, Unix, and Perl to do some cutting-edge
science, with a PC from the comfort of your living room. Ian is a coauthor
of BLAST.
Sequence Database Data Formats -- Bioinformatics, as we know it
today, exists because of the vast number of sequence databases created in
the last 15 years. Part 1 of Sequence Analysis in a Nutshell
explains the more popular flat file formats and focuses on describing, in
detail, their sometimes cryptic content. Get a free trial to read this and four other O'Reilly books on Safari.
An Interview with George Dyson -- In this interview with chromatic, George Dyson talks about his
upcoming OSCON keynote in which he'll explore the pioneering work in
computation and computational biology at the Institute for Advanced Study,
drawing parallels between that world and open source development.
Grid Engine 5.3p3 Is Now Ready -- This patch release changes the binaries, the
architecture independent files ("common" package), and
the documentation ("doc" package). The updated PDF
documentation set for SGE and SGEEE is provided by
Sun Microsystems as a courtesy contribution for users
of the Grid Engine open source software.
Sift, Stir, Code: O'Reilly
Cookbooks -- Looking for the right ingredients to solve a programming
problem? Look no further than O'Reilly Cookbooks. Each cookbook contains
hundreds of programming recipes presented in a special
Problem/Solution/Discussion format, and includes hundreds of scripts,
programs, and command sequences you can use to solve specific dilemmas. Get
your daily recipes and view our complete list of Programming Cookbooks for
Geeks.
Stein
Gives Bioinformatics Ten Years to Live -- In his continuing
coverage from the conference floor, Daniel H. Steinberg reports on Lincoln
Stein's keynote, "Bioinformatics: Gone in 2012," at the O'Reilly Bioinformatics
Technology Conference. Get all the news from this year's event on O'Reilly Network's BioCon 2003 Conference
Coverage page.